Sparse Autoencoders Map Brain-LLM Alignment onto Cortical Semantic Topography
arXiv:2605.23035v1 Announce Type: cross Abstract: Intermediate layers of large language models (LLMs) best predict human brain responses to language, one of the most robust findings in computational neurolinguistics, yet why remains mechanistically unexplained. We address this gap by bridging sparse autoencoders (SAEs) from mechanistic interpretability with neural encoding models, decomposing GPT-2 XL and Llama-3.1-8B into 16K-32K interpretable features per layer. A human-validated taxonomy ($\kappa \geq 0.74$) reveals that semantic features alone recover 94% of peak encoding performance ($r=0.285$), substantially exceeding variance-matched baselines ($p<0.001$, $d=1.31$). Beyond this aggregate dominance, we test a novel cortical topography prediction: five semantic subcategories derived a priori from three independent neuroscience programs should map onto distinct brain regions. A formal convergence test confirms this alignment (Spearman $\rho=0.72$, $p<0.001$; hypergeometric $p=0.007